Jatropha Genome Database

JcCA0247191.10 (JcS_200032.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0247191
Scaffold:
JcS_200032 JcCB0995411(+) =JcCB0295761(+) =JcPR01C6D2I(-) =JcCA0247191(-) =JcCD0149682(-) =JcCB0171531(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q84P54_SOLLC 243 94.9 99.2 (tr|Q84P54) Gamma aminobutyrate transaminase isoform1 OS=Solanum lycopersicum GN=LeGABA-TP1 PE=2 SV=1
Arabidopsis_pep AT3G22200.1 235 92.4 95.8 | Symbols: POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase | chr3:7835286-7838863 FORWARD
soybean_pep Glyma11g10190.1 239 94.1 98.3  
Medicago_pep IMGA|Medtr4g103670.1 226 89.0 95.8 Aminotransferase class-III; ; chr04_pseudomolecule_IMGAG_V3 22386014-22374646 E EGN_Mt090430 20090702
grape_pep GSVIVT01015824001 239 94.1 98.3  
castor_bean_cds 30106.m000666 464 91.5 91.5 aminobutyrate aminotransferase, putative
castor_bean_pep 30106.m000666 241 94.9 98.3 aminobutyrate aminotransferase, putative
JAT_13201ests gi|268524469|gb|FM895149.1|FM895149 557 100.0 100.0 FM895149 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001928, mRNA sequence
KJC_r1 KJC_c01532 702 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0247191.10 length: 136 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 1.5e-46 17-136
HMMPfam PF00202 Aminotran_3 2.4e-20 7-136
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.3e-24 12-136
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 2.3e-27 12-136
no_ID  
HMMPanther PTHR11986:SF24 AMINOTRANSFERASE 1.5e-46 17-136
Seg seg seg NA 4-14