Jatropha Genome Database

JcCA0242371.10 (JcS_101935.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0242371
Scaffold:
JcS_101935 JcPR04HILCK(+) =JcCB0470521(-) =JcCA0242371(+) =JcCB0366321(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9R8C2_RICCO 250 87.8 91.4 (tr|B9R8C2) Rac gtpase, putative OS=Ricinus communis GN=RCOM_1598600 PE=3 SV=1
Arabidopsis_pep AT1G75840.1 247 87.1 91.4 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase | chr1:28475964-28477377 FORWARD
soybean_pep Glyma06g02580.2 247 86.3 91.4  
Medicago_pep IMGA|Medtr8g089410.1 244 96.7 100.0 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19209541-19213679 F EGN_Mt090430 20090702
grape_pep GSVIVT01009947001 250 87.1 91.4  
castor_bean_cds 30170.m014385 494 92.2 92.2 rac gtpase, putative
castor_bean_pep 30170.m014385 250 87.8 91.4 rac gtpase, putative
JAT_13201ests gi|268516974|gb|FM892526.1|FM892526 297 85.7 85.7 FM892526 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095, mRNA sequence
KJC_r1 KJC_c00209 297 85.7 85.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0242371.10 length: 146 aa.
IPR001806 Ras GTPase
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 2.7e-26 7-28
30-46
47-69
109-122
IPR003577 Ras small GTPase, Ras type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00173 no description 3.9e-09 4-136
IPR003578 Small GTPase, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 no description 5.3e-63 9-146
ProfileScan PS51420 RHO 19.391 1-146
IPR003579 Ras small GTPase, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 no description 7.5e-11 7-146
IPR005225 Small GTP-binding protein
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 4.9e-22 4-142
IPR013753 Ras
HMMPfam PF00071 Ras 5.4e-40 8-120
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.7e-40 7-120
HMMPanther PTHR11708 RAS-RELATED 8e-106 12-120
HMMPanther PTHR11708:SF285RAS-RELATED PROTEIN 8e-106 12-120
superfamily SSF52540 P-loop 6.4e-39 2-120