Jatropha Genome Database

JcCA0240721.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0240721
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SRH6_RICCO 190 58.6 61.8 (tr|B9SRH6) Dehydration-responsive element-binding protein 1B, putative OS=Ricinus communis GN=RCOM_0384200 PE=4 SV=1
Arabidopsis_pep AT2G36450.1 135 49.1 55.3 | Symbols: HRD | HRD (HARDY); DNA binding / transcription activator/ transcription factor | chr2:15294303-15294857 REVERSE
soybean_pep Glyma15g02900.1 169 51.1 55.4  
Medicago_pep IMGA|Medtr1g129460.1 107 38.3 46.7 Pathogenesis-related transcriptional factor and ERF chr01_pseudomolecule_IMGAG_V3 28924038-28925362 F EGN_Mt090430 20090702
grape_pep GSVIVT01033793001 176 53.5 58.4  
castor_bean_cds 29092.m000462 283 87.5 87.5 Dehydration-responsive element-binding protein 1B, putative
castor_bean_pep 29092.m000462 190 58.6 61.8 Dehydration-responsive element-binding protein 1B, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0240721.10 length: 213 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 4.3e-08 33-44
55-71
Gene3D G3DSA:3.30.730.10 no description 5.4e-22 31-92
HMMPfam PF00847 AP2 8.8e-16 31-81
HMMSmart SM00380 no description 4.1e-34 32-95
ProfileScan PS51032 AP2_ERF 22.893 32-89
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 3.2e-22 31-92
no_ID  
Seg seg seg NA 8-27
68-78
108-125
128-145
187-198