| JcS_100081 | JcCB0426941(-) =JcCB0432131(-) =JcCA0239311(-) =JcCB0018161(-) =JcCB0143421(+) =JcCB0298051(-) =JcPR03CFBZV(-) =JcCD0056327(+) =JcCB0081401(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5AS37_VITVI | 1669 | 62.3 | 75.7 | (tr|A5AS37) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032634 PE=4 SV=1 |
| Arabidopsis_pep | AT4G23160.1 | 305 | 35.6 | 54.7 | | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD |
| soybean_pep | Glyma03g04980.1 | 849 | 40.1 | 57.9 | |
| Medicago_pep | IMGA|Medtr5g048830.1 | 484 | 33.1 | 51.5 | Polynucleotidyl transferase, Ribonuclease H fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01028612001 | 332 | 30.8 | 47.9 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0239311.10 | length: 1284 aa. | |||
| IPR001584 | Integrase, catalytic core | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 1.3e-33 | 476-592 |
| ProfileScan | PS50994 | INTEGRASE | 24.391 | 469-638 |
| IPR001878 | Zinc finger, CCHC-type | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF00098 | zf-CCHC | 8.2e-06 | 243-259 |
| HMMSmart | SM00343 | no description | 0.00038 | 243-259 |
| ProfileScan | PS50158 | ZF_CCHC | 10.296 | 244-259 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 2.8e-42 | 469-638 |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase | |||
| HMMPfam | PF07727 | RVT_2 | 4.8e-87 | 812-1045 |
| no_ID | ||||
| Gene3D | G3DSA:3.30.420.10 | no description | 1.4e-29 | 499-643 |
| HMMPanther | PTHR11439 | GAG-POL-RELATED | 0 | 9-1282 |
| Seg | seg | seg | NA | 163-172 203-221 222-231 |
| superfamily | SSF56672 | DNA/RNA | 2.3e-26 | 811-1240 |