Jatropha Genome Database

JcCA0238091.10 (JcS_100103.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0238091
Scaffold:
JcS_100103 JcCB0899951(-) =JcCA0238091(-) =JcCA0138821(+) =JcCB0499871(-) =JcCA0141021(-) =JcCA0265291(-) =JcCB0423521(+) =JcCD0091987(+) =JcCA0237721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9H152_POPTR 239 74.8 77.4 (tr|B9H152) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831296 PE=4 SV=1
Arabidopsis_pep AT2G21150.1 222 69.2 73.6 | Symbols: XCT | XCT (XAP5 CIRCADIAN TIMEKEEPER) | chr2:9065397-9067921 FORWARD
soybean_pep Glyma08g04680.1 230 73.3 75.2  
Medicago_pep IMGA|Medtr4g157300.1 226 69.8 75.3 XAP5 protein chr04_pseudomolecule_IMGAG_V3 39165192-39170843 E EGN_Mt090430 20090702
grape_pep GSVIVT01024083001 232 74.2 76.1  
castor_bean_cds 29711.m000321 545 87.5 87.5 Protein FAM50A, putative
castor_bean_pep 29711.m000321 238 76.1 76.7 Protein FAM50A, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0238091.10 length: 183 aa.
IPR007005 XAP5 protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
HMMPanther PTHR12722 XAP-5 1.5e-64 60-183
HMMPfam PF04921 XAP5 2e-51 21-183
no_ID  
Coil coil coiled-coil NA 1-29
Seg seg seg NA 1-24
38-54
76-89