Jatropha Genome Database

JcCA0235871.10 (JcS_105406.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0235871
Scaffold:
JcS_105406 JcCB0697711(+) =JcCB0163571(+) =JcCA0235871(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RXY1_RICCO 328 71.9 84.2 (tr|B9RXY1) S-locus-specific glycoprotein S13, putative OS=Ricinus communis GN=RCOM_0907010 PE=4 SV=1
Arabidopsis_pep AT4G27290.1 160 38.9 57.2 | Symbols: | ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | chr4:13666281-13669202 FORWARD
soybean_pep Glyma13g32280.1 184 42.5 61.4  
Medicago_pep IMGA|Medtr2g011200.1 185 42.4 60.5 Protein kinase; EGF-like, subtype 2; S-locus glycoprotein; Curculin-like (mannose-binding) lectin; Apple-like chr02_pseudomolecule_IMGAG_V3 2844024-2840223 H EGN_Mt090430 20090702
grape_pep GSVIVT01014504001 194 45.4 61.4  
castor_bean_cds 29842.m003713 135 82.9 82.9 S-locus-specific glycoprotein S13 precursor, putative
castor_bean_pep 29842.m003713 328 71.9 84.2 S-locus-specific glycoprotein S13 precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0235871.10 length: 207 aa.
IPR000858 S-locus glycoprotein
method AccNumber shortName E-value location
Biological Process GO:0048544 recognition of pollen    
HMMPfam PF00954 S_locus_glycop 2.1e-23 5-103
IPR003609 Apple-like
HMMSmart SM00473 no description 4.6e-09 126-202
ProfileScan PS50948 PAN 10.095 125-204
IPR013227 PAN-2 domain
HMMPfam PF08276 PAN_2 4.1e-18 125-188
no_ID  
HMMPanther PTHR23258 SERINE-THREONINE 9.3e-06 63-108
HMMPanther PTHR23258:SF434RECEPTOR-LIKE PROTEIN 9.3e-06 63-108