Jatropha Genome Database

JcCA0234541.10 (JcS_100421.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0234541
Scaffold:
JcS_100421 JcCA0234541(+) =JcCA0073821(+) =JcCB0268641(+) =JcCB0128551(-) =JcCA0077901(-) =JcCB0534371(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q7XP09_ORYSJ 98.6 42.5 55.2 (tr|Q7XP09) OSJNBb0013J13.11 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0013J13.11 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 50.4 33.7 50.6 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma06g18690.1 83.2 50.6 63.5  
Medicago_pep IMGA|Medtr4g080020.1 55.1 36.5 50.6 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0234541.10 length: 381 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 9.3e-25 296-381
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 6e-31 1-381