Jatropha Genome Database

JcCA0234331.10 (JcS_100218.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0234331
Scaffold:
JcS_100218 JcCA0234331(-) =JcCB0701471(-) =JcCA0278721(-) =JcCD0171023(+) =JcCA0154181(-) =JcCA0276311(+) =JcCB0448381(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SI15_RICCO 142 78.2 94.9 (tr|B9SI15) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0612080 PE=4 SV=1
Arabidopsis_pep AT3G47160.1 130 71.8 88.5 | Symbols: | protein binding / zinc ion binding | chr3:17360238-17361879 REVERSE
soybean_pep Glyma03g08250.1 122 65.4 87.2  
Medicago_pep IMGA|Medtr4g013020.1 119 64.1 85.9 Zinc finger, RING-type chr04_pseudomolecule_IMGAG_V3 2447170-2443828 E EGN_Mt090430 20090702
grape_pep GSVIVT01033965001 137 73.1 93.6  
castor_bean_cds 29681.m001336 228 90.7 90.7 ubiquitin-protein ligase, putative
castor_bean_pep 29681.m001336 142 78.2 94.9 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0234331.10 length: 151 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 no description 0.0091 51-82
no_ID  
Gene3D G3DSA:3.30.40.10 no description 0.00035 45-78
HMMPanther PTHR11224 MAKORIN-RELATED 1.6e-06 15-78
HMMPanther PTHR11224:SF14 MAKORIN 1.6e-06 15-78
superfamily SSF57850 RING/U-box 2.4e-07 44-80