Jatropha Genome Database

JcCA0231741.10 (JcS_101917.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0231741
Scaffold:
JcS_101917 JcPR03D68EY(-) =JcCA0118761(-) =JcCA0231741(+) =JcCB0510111(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R873_RICCO 484 81.1 87.7 (tr|B9R873) Endo-1,4-beta-glucanase, putative OS=Ricinus communis GN=RCOM_1597400 PE=4 SV=1
Arabidopsis_pep AT1G19940.1 427 71.2 83.2 | Symbols: AtGH9B5 | AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr1:6918323-6920268 REVERSE
soybean_pep Glyma04g02740.1 446 72.6 84.4  
Medicago_pep IMGA|Medtr3g156150.1 436 70.8 83.3 Glycoside transferase, six-hairpin, subgroup chr03_pseudomolecule_IMGAG_V3 40926146-40922351 E EGN_Mt090430 20090702
grape_pep GSVIVT01009881001 461 76.4 86.1  
castor_bean_cds 30170.m013790 654 84.9 84.9 endo-1,4-beta-glucanase, putative
castor_bean_pep 30170.m013790 484 81.1 87.7 endo-1,4-beta-glucanase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0231741.10 length: 290 aa.
IPR001701 Glycoside hydrolase, family 9
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPanther PTHR22298:SF3 ENDO-1,4-BETA-GLUCANASE 2.4e-137 6-290
HMMPfam PF00759 Glyco_hydro_9 9.1e-89 6-286
IPR008928 Six-hairpin glycosidase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48208 Six-hairpin 6.6e-85 6-288
IPR012341 Six-hairpin glycosidase
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:1.50.10.10 no description 5.1e-80 6-289
IPR018221 Glycoside hydrolase, family 9, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS00592 GLYCOSYL_HYDROL_F9_1 NA 267-283
no_ID  
HMMPanther PTHR22298 ENDO-1,4-BETA-GLUCANASE 2.4e-137 6-290
Seg seg seg NA 40-54