Jatropha Genome Database

JcCA0231431.10 (JcS_107660.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0231431
Scaffold:
JcS_107660 JcCA0311651(-) =JcCA0231431(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BIR7_VITVI 790 68.4 83.3 (tr|A5BIR7) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004139 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 431 44.3 63.4 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma10g01130.1 555 49.9 66.9  
Medicago_pep IMGA|Medtr4g080020.1 483 48.0 64.2 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01012382001 204 49.7 66.8  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0231431.10 length: 854 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 1.5e-94 334-577
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 0 65-809
Seg seg seg NA 130-141
173-194
224-237
superfamily SSF56672 DNA/RNA 1e-39 333-767