Jatropha Genome Database

JcCA0230351.10 (JcS_101335.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0230351
Scaffold:
JcS_101335 JcCB0067131(+) =JcCA0230351(-) =JcCA0282441(-) =JcCB0372241(-) =JcCA0226201(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RLZ9_RICCO 534 81.4 87.9 (tr|B9RLZ9) Endo-1,4-beta-glucanase, putative OS=Ricinus communis GN=RCOM_1076590 PE=4 SV=1
Arabidopsis_pep AT1G65610.1 402 60.3 76.9 | Symbols: ATGH9A2, KOR2 | KOR2; catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr1:24391823-24395261 REVERSE
soybean_pep Glyma20g06820.1 466 70.7 81.1  
Medicago_pep IMGA|Medtr3g106800.1 474 70.7 81.8 Glycoside transferase, six-hairpin, subgroup chr03_pseudomolecule_IMGAG_V3 26983819-26989360 H EGN_Mt090430 20090702
grape_pep GSVIVT01006265001 494 74.6 84.4  
castor_bean_cds 29929.m004502 837 86.0 86.0 endo-1,4-beta-glucanase, putative
castor_bean_pep 29929.m004502 534 81.4 87.9 endo-1,4-beta-glucanase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0230351.10 length: 324 aa.
IPR001701 Glycoside hydrolase, family 9
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPanther PTHR22298:SF3 ENDO-1,4-BETA-GLUCANASE 4.2e-118 4-323
HMMPfam PF00759 Glyco_hydro_9 9.4e-69 3-289
IPR008928 Six-hairpin glycosidase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48208 Six-hairpin 5.4e-64 2-296
IPR012341 Six-hairpin glycosidase
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:1.50.10.10 no description 1.2e-60 2-296
IPR018221 Glycoside hydrolase, family 9, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS00592 GLYCOSYL_HYDROL_F9_1 NA 204-220
PatternScan PS00698 GLYCOSYL_HYDROL_F9_2 NA 264-282
no_ID  
HMMPanther PTHR22298 ENDO-1,4-BETA-GLUCANASE 4.2e-118 4-323
Seg seg seg NA 278-291
309-324