Jatropha Genome Database

JcCA0230221.10 (JcS_101652.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0230221
Scaffold:
JcS_101652 JcCA0230221(+) =JcCA0310901(+) =JcCA0261141(-) =JcCB0284721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SWZ0_RICCO 254 94.6 97.7 (tr|B9SWZ0) Exosome complex exonuclease RRP41, putative OS=Ricinus communis GN=RCOM_0490080 PE=4 SV=1
Arabidopsis_pep AT3G61620.2 205 77.7 88.5 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA binding | chr3:22801382-22802910 REVERSE
soybean_pep Glyma17g11020.2 250 90.7 97.7  
Medicago_pep IMGA|Medtr7g143590.1 249 90.7 97.7 3 exoribonuclease chr07_pseudomolecule_IMGAG_V3 34495267-34490674 E EGN_Mt090430 20090702
grape_pep GSVIVT01027043001 251 92.2 97.7  
castor_bean_cds 29601.m000451 529 93.0 93.0 Exosome complex exonuclease RRP41, putative
castor_bean_pep 29601.m000451 254 94.6 97.7 Exosome complex exonuclease RRP41, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0230221.10 length: 129 aa.
IPR001247 Exoribonuclease, phosphorolytic domain 1
method AccNumber shortName E-value location
Molecular Function GO:0000175 3'-5'-exoribonuclease activity    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006396 RNA processing    
HMMPfam PF01138 RNase_PH 1.4e-28 18-128
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 2.4e-28 17-129
no_ID  
HMMPanther PTHR11953 RIBONUCLEASE 8.8e-42 1-129