Jatropha Genome Database

JcCA0224551.10 (JcS_100484.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0224551
Scaffold:
JcS_100484 JcPR03AVEVQ(-) =JcCB0456251(+) =JcCA0149941(+) =JcCB0490461(+) =JcCB0572431(-) =JcCA0224551(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RN44_RICCO 180 84.6 94.2 (tr|B9RN44) NEFA-interacting nuclear protein NIP30, putative OS=Ricinus communis GN=RCOM_1343450 PE=4 SV=1
Arabidopsis_pep AT3G62140.1 164 76.9 91.3 | Symbols: | unknown protein | chr3:23007277-23008626 FORWARD
soybean_pep Glyma19g40910.1 169 77.9 91.3  
Medicago_pep IMGA|Medtr7g134050.1 165 74.5 88.7 hypothetical protein chr07_pseudomolecule_IMGAG_V3 31544322-31539684 F EGN_Mt090430 20090702
grape_pep GSVIVT01028253001 176 88.5 94.8  
castor_bean_cds 30076.m004555 311 89.2 89.2 NEFA-interacting nuclear protein NIP30, putative
castor_bean_pep 30076.m004555 180 84.6 94.2 NEFA-interacting nuclear protein NIP30, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0224551.10 length: 106 aa.
IPR019331 NEFA-interacting nuclear protein NIP30, N-terminal
method AccNumber shortName E-value location
HMMPfam PF10187 Nefa_Nip30_N 2.9e-24 14-103
no_ID  
Coil coil coiled-coil NA 77-98
HMMPanther PTHR13495 NEFA-INTERACTING 9.1e-20 1-106