Jatropha Genome Database

JcCA0224291.10 (JcS_200147.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0224291
Scaffold:
JcS_200147 JcCA0224291(+) =JcPR04JLXX1(-) =JHL02J17r(+) =JcCD0053272(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7M5I2_ARALY 144 93.0 98.6 (tr|D7M5I2) Nucleoside-triphosphatase/ nucleotide binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_351718 PE=4 SV=1
Arabidopsis_pep AT5G27740.1 140 90.1 97.2 | Symbols: EMB2775 | EMB2775 (EMBRYO DEFECTIVE 2775); DNA binding / nucleoside-triphosphatase/ nucleotide binding | chr5:9823831-9826869 FORWARD
soybean_pep Glyma06g11980.1 78.2 46.3 70.1  
Medicago_pep IMGA|Medtr3g100750.1 80.1 48.5 69.1 AAA ATPase, central region chr03_pseudomolecule_IMGAG_V3 24245152-24251862 F EGN_Mt090430 20090702
grape_pep GSVIVT01022436001 134 84.5 94.4  
castor_bean_cds 30072.m000942 224 88.5 88.5 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 30072.m000942 144 93.0 97.2 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests gi|268522334|gb|FM894479.1|FM894479 426 100.0 100.0 FM894479 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000151, mRNA sequence
KJC_r1 KJC_c03863 349 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0224291.10 length: 71 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.300 no description 1.7e-17 1-69
HMMPanther PTHR13779 HOLLIDAY 7.4e-05 11-58
HMMPfam PF03215 Rad17 7e-07 2-55
superfamily SSF52540 P-loop 5.6e-16 3-60