Jatropha Genome Database

JcCA0220511.30 (JcS_103170.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0220511
Scaffold:
JcS_103170 JcCA0220511(+) =JcCB0448101(-) =JcCD0100451(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5C9U3_VITVI 79.0 34.0 49.3 (tr|A5C9U3) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010121 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep --No_Hits--        
Medicago_pep --No_Hits--        
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0220511.30 length: 238 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 9.6e-05 110-126
HMMSmart SM00343 no description 0.0037 110-126
ProfileScan PS50158 ZF_CCHC 9.059 110-126
IPR013242 Retroviral aspartyl protease
HMMPfam PF08284 RVP_2 1.1e-08 163-236
no_ID  
Seg seg seg NA 3-20
29-46
57-87
137-152