Jatropha Genome Database

JcCA0193141.20 (JcS_106609.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0193141
Scaffold:
JcS_106609 JcCA0193141(-) =JcCB0469261(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RMJ5_RICCO 100 83.3 92.6 (tr|B9RMJ5) AMP dependent CoA ligase, putative OS=Ricinus communis GN=RCOM_1081170 PE=4 SV=1
Arabidopsis_pep AT5G63380.1 79.0 54.7 88.7 | Symbols: | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | chr5:25387581-25390026 REVERSE
soybean_pep Glyma19g22460.1 85.1 70.4 87.0  
Medicago_pep IMGA|Medtr1g087380.1 82.4 59.3 88.9 AMP-dependent synthetase and ligase chr01_pseudomolecule_IMGAG_V3 17602444-17596379 E EGN_Mt090430 20090702
grape_pep GSVIVT01008498001 84.3 66.0 88.7  
castor_bean_cds 29929.m004700 127 83.7 83.7 AMP dependent CoA ligase, putative
castor_bean_pep 29929.m004700 100 83.3 92.6 AMP dependent CoA ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0193141.20 length: 91 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.300.30 no description 1.4e-06 19-72
HMMPanther PTHR11968 ATP-DEPENDENT 9.4e-22 20-72
HMMPanther PTHR11968:SF43 4-COUMARATE--COA 9.4e-22 20-72
superfamily SSF56801 Acetyl-CoA 7.5e-11 19-72