Jatropha Genome Database

JcCA0155261.40 (JcS_109458.40)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0155261
Scaffold:
JcS_109458 JcCB0301441(+) =JcCA0155261(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q8H6Q8_PONTR 286 36.9 52.4 (tr|Q8H6Q8) CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma20g06230.1 219 44.9 60.6  
Medicago_pep --No_Hits--        
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests gi|268517507|gb|FM889218.1|FM889218 291 82.9 82.9 FM889218 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002818, mRNA sequence
KJC_r1 KJC_c05637 67.9 84.9 84.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0155261.40 length: 650 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 1.4e-05 8-23
ProfileScan PS50158 ZF_CCHC 9.752 9-23
no_ID  
Coil coil coiled-coil NA 216-237
263-284
Seg seg seg NA 45-58
93-107
291-302