Jatropha Genome Database

JcCA0155261.20 (JcS_109458.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0155261
Scaffold:
JcS_109458 JcCB0301441(+) =JcCA0155261(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SSK3_RICCO 809 85.4 89.9 (tr|B9SSK3) Aspartate aminotransferase, putative OS=Ricinus communis GN=RCOM_0984440 PE=3 SV=1
Arabidopsis_pep AT2G22250.3 635 72.6 82.4 | Symbols: ATAAT, AAT, MEE17 | aminotransferase class I and II family protein | chr2:9458011-9460297 REVERSE
soybean_pep Glyma08g14720.1 693 80.8 88.6  
Medicago_pep IMGA|Medtr4g140320.1 692 76.5 85.2 Aminotransferase, class I and II; ; chr04_pseudomolecule_IMGAG_V3 34365416-34369440 E EGN_Mt090430 20090702
grape_pep GSVIVT01022163001 734 80.3 87.7  
castor_bean_cds 29877.m000466 1441 89.0 89.0 aspartate aminotransferase, putative
castor_bean_pep 29877.m000466 809 85.4 89.9 aspartate aminotransferase, putative
JAT_13201ests gi|268522945|gb|FM896388.1|FM896388 918 98.6 98.6 FM896388 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003602, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0155261.20 length: 485 aa.
IPR001176 1-aminocyclopropane-1-carboxylate synthase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity    
FPrintScan PR00753 ACCSYNTHASE 6.4e-06 193-214
240-264
277-300
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 313-326
IPR004839 Aminotransferase, class I/II
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 3.3e-72 110-472
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.6e-72 123-364
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 4.9e-115 76-476
no_ID  
HMMPanther PTHR11751 SUBGROUP 6.1e-171 126-476
HMMPanther PTHR11751:SF35 ASPARTATE 6.1e-171 126-476
Seg seg seg NA 2-14
349-368