| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9HNU4_POPTR | 152 | 88.4 | 94.2 | (tr|B9HNU4) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_877350 PE=3 SV=1 |
| Arabidopsis_pep | AT5G13790.1 | 127 | 78.9 | 90.8 | | Symbols: AGL15 | AGL15 (AGAMOUS-LIKE 15); DNA binding / transcription factor | chr5:4449128-4450802 REVERSE |
| soybean_pep | Glyma02g33040.1 | 120 | 76.0 | 90.7 | |
| Medicago_pep | IMGA|Medtr4g147260.1 | 108 | 71.2 | 86.3 | Transcription factor, MADS-box; Transcription factor, K-box chr04_pseudomolecule_IMGAG_V3 36883844-36877638 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01001437001 | 144 | 83.7 | 88.4 | |
| castor_bean_cds | 30174.m008934 | 60.0 | 97.1 | 97.1 | mads box protein, putative |
| castor_bean_pep | 30174.m008934 | 110 | 62.2 | 80.5 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0155091.10 | length: 86 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 4.1e-30 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 9.9e-27 | 9-59 |
| HMMSmart | SM00432 | no description | 2.5e-41 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 32.352 | 1-61 |
| superfamily | SSF55455 | SRF-like | 2.2e-30 | 1-84 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 1.1e-42 | 10-84 |
| HMMPanther | PTHR11945:SF19 | MADS | 1.1e-42 | 10-84 |