Jatropha Genome Database

JcCA0155031.20 (JcS_102519.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0155031
Scaffold:
JcS_102519 JcCB0063631(-) =JcCA0155031(+) =JcCA0312771(+) =JcCB0642431(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9R7J4_RICCO 175 47.1 50.2 (tr|B9R7J4) Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1592450 PE=4 SV=1
Arabidopsis_pep AT3G50410.1 122 67.4 77.5 | Symbols: OBP1 | OBP1 (OBF BINDING PROTEIN 1); DNA binding / protein binding / transcription factor | chr3:18709872-18710633 FORWARD
soybean_pep Glyma16g26030.1 150 39.8 45.7  
Medicago_pep IMGA|Medtr7g025880.1 110 66.2 72.7 Zinc finger, Dof-type chr07_pseudomolecule_IMGAG_V3 6479761-6477938 E EGN_Mt090430 20090702
grape_pep GSVIVT01016887001 114 75.0 79.2  
castor_bean_cds 30170.m013941 97.6 81.6 81.6 zinc finger protein, putative
castor_bean_pep 30170.m013941 175 47.1 50.2 zinc finger protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00949 69.9 89.8 89.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0155031.20 length: 245 aa.
IPR003851 Zinc finger, Dof-type
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0008270 zinc ion binding    
Biological Process GO:0045449 regulation of transcription    
BlastProDom PD007478 DOF11_ARATH_Q8L9V6; 1e-24 14-78
HMMPfam PF02701 zf-Dof 1.3e-36 22-80
PatternScan PS01361 ZF_DOF_1 NA 26-62
ProfileScan PS50884 ZF_DOF_2 29.469 24-78
no_ID  
Seg seg seg NA 83-105
132-148
158-174
190-210