Jatropha Genome Database

JcCA0155011.10 (JcS_102779.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0155011
Scaffold:
JcS_102779 JcCD0133948(+) =JcCA0155011(+) =JcCB0499981(+) =JcCB0991421(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7SVQ4_VITVI 169 77.3 80.0 (tr|D7SVQ4) Whole genome shotgun sequence of line PN40024, scaffold_68.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033096001 PE=4 SV=1
Arabidopsis_pep AT3G27100.1 127 56.1 72.8 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 197 Blast hits to 197 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 8; Plants - 24; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | chr3:9994743-9995923 REVERSE
soybean_pep Glyma16g06110.1 159 69.7 81.7  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01033096001 169 77.3 80.0  
castor_bean_cds 30190.m010931 285 92.0 92.0 conserved hypothetical protein
castor_bean_pep 30190.m010931 130 98.4 98.4 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0155011.10 length: 110 aa.
IPR018783 Transcription factor, enhancer of yellow 2
method AccNumber shortName E-value location
HMMPfam PF10163 EnY2 2.1e-32 22-105
no_ID  
Seg seg seg NA 37-49