Jatropha Genome Database

JcCA0155001.30 (JcS_101329.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0155001
Scaffold:
JcS_101329 JcCB0647551(-) =JcCA0155001(-) =JcCB0133611(-) =JcCB0059341(-) =JcCB0598461(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RWM0_RICCO 807 67.3 77.0 (tr|B9RWM0) 9-cis-epoxycarotenoid dioxygenase, putative OS=Ricinus communis GN=RCOM_1021470 PE=4 SV=1
Arabidopsis_pep AT3G24220.1 708 64.1 79.9 | Symbols: NCED6, ATNCED6 | NCED6 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6); 9-cis-epoxycarotenoid dioxygenase | chr3:8761439-8763172 FORWARD
soybean_pep Glyma08g10190.1 583 57.4 70.8  
Medicago_pep IMGA|Medtr5g025250.1 312 35.6 54.7 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10093326-10091325 E EGN_Mt090430 20090702
grape_pep GSVIVT01029057001 670 62.2 75.6  
castor_bean_cds 29904.m002987 549 80.7 80.7 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 29904.m002987 807 67.3 77.0 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0155001.30 length: 609 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 1.4e-212 93-601
HMMPfam PF03055 RPE65 4.3e-129 132-599
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 1.4e-212 93-601
Seg seg seg NA 8-14
53-78
527-541
544-553