Jatropha Genome Database

JcCA0154851.10 (JcS_102072.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154851
Scaffold:
JcS_102072 JcCB0202681(+) =JcCA0149671(-) =JcCB0233111(-) =JcCA0154851(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RUE4_RICCO 343 85.3 94.2 (tr|B9RUE4) Aberrant large forked product, putative OS=Ricinus communis GN=RCOM_0852170 PE=4 SV=1
Arabidopsis_pep AT5G40160.1 293 76.1 84.0 | Symbols: EMB506 | EMB506 (embryo defective 506); protein binding | chr5:16062726-16064301 REVERSE
soybean_pep Glyma18g05060.1 307 78.1 88.0  
Medicago_pep IMGA|Medtr2g055950.1 298 74.1 87.3 Ankyrin chr02_pseudomolecule_IMGAG_V3 15102819-15107720 E EGN_Mt090430 20090702
grape_pep GSVIVT01032525001 327 82.8 90.1  
castor_bean_cds 29822.m003391 547 87.4 87.4 aberrant large forked product, putative
castor_bean_pep 29822.m003391 343 85.3 94.2 aberrant large forked product, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154851.10 length: 192 aa.
IPR002110 Ankyrin repeat
method AccNumber shortName E-value location
HMMPfam PF00023 Ank 3.3e-09 93-125
127-158
HMMSmart SM00248 no description 6e+02 27-56
60-89
93-122
126-155
159-192
ProfileScan PS50088 ANK_REPEAT 14.506 60-92
93-125
126-158
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.5e-38 8-171
ProfileScan PS50297 ANK_REP_REGION 42.415 27-166
superfamily SSF48403 Ankyrin 9.5e-43 20-171
no_ID  
HMMPanther PTHR18958 ANKYRIN 1.2e-81 24-184
HMMPanther PTHR18958:SF200ABERRANT LARGE 1.2e-81 24-184