Jatropha Genome Database

JcCA0154801.50 (JcS_100029.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154801
Scaffold:
JcS_100029 JcCA0079011(+) =JcCB0224691(+) =JcCB0309421(+) =JcCB0216031(+) =JcCB0293431(+) =JcCB0364041(-) =JcCB0094891(+) =JcCB0201931(-) =JcCA0154801(-) =JcCB0542031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q09HM7_9ROSI 187 100.0 100.0 (tr|Q09HM7) Putative F-box and leucine-rich repeat protein OS=Jatropha curcas PE=4 SV=1
Arabidopsis_pep AT5G23340.1 132 70.0 83.3 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box family protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits to 3545 proteins in 210 species: Archae - 0; Bacteria - 454; Metazoa - 4575; Fungi - 774; Plants - 2118; Viruses - 15; Other Eukaryotes - 1159 (source: NCBI BLink). | chr5:7856314-7857983 FORWARD
soybean_pep Glyma20g23570.1 133 66.7 83.3  
Medicago_pep IMGA|Medtr7g009840.1 86.3 66.7 81.7 Leucine-rich repeat, cysteine-containing subtype chr07_pseudomolecule_IMGAG_V3 1924311-1926211 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds 30131.m007259 268 87.6 87.6 similarity to glucose regulated repressor protein, putative
castor_bean_pep 30131.m007259 162 83.3 93.3 similarity to glucose regulated repressor protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154801.50 length: 90 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 5.1e-05 1-79
HMMPanther PTHR23125 F-BOX/LEUCINE 2.4e-21 1-53
HMMPanther PTHR23125:SF66 gb 2.4e-21 1-53