Jatropha Genome Database

JcCA0154781.10 (JcS_106500.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154781
Scaffold:
JcS_106500 JcCA0154781(-) =JcCB0424591(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SAM3_RICCO 761 81.9 86.4 (tr|B9SAM3) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1104670 PE=4 SV=1
Arabidopsis_pep AT2G36360.2 588 63.3 75.9 | Symbols: | kelch repeat-containing protein | chr2:15243461-15247523 REVERSE
soybean_pep Glyma20g32900.1 601 65.3 73.2  
Medicago_pep IMGA|Medtr1g116960.1 341 76.1 82.2 Serine/threonine protein phosphatase, BSU1 chr01_pseudomolecule_IMGAG_V3 24898971-24893200 E EGN_Mt090430 20090702
grape_pep GSVIVT01034738001 677 71.9 81.1  
castor_bean_cds 29939.m000539 1374 88.1 88.1 conserved hypothetical protein
castor_bean_pep 29939.m000539 761 81.9 86.4 conserved hypothetical protein
JAT_13201ests gi|268523093|gb|FM894676.1|FM894676 270 97.4 97.4 FM894676 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000493, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154781.10 length: 448 aa.
IPR006652 Kelch repeat type 1
method AccNumber shortName E-value location
HMMPfam PF01344 Kelch_1 6.8e-05 23-67
181-231
HMMSmart SM00612 no description 0.13 35-84
86-135
IPR011043 Galactose oxidase/kelch, beta-propeller
superfamily SSF50965 Galactose 3.8e-36 20-267
IPR011498 Kelch repeat type 2
Molecular Function GO:0005515 protein binding    
HMMPfam PF07646 Kelch_2 4.5e-07 79-119
IPR015915 Kelch-type beta propeller
Gene3D G3DSA:2.120.10.80 no description 5.2e-35 21-279
no_ID  
Coil coil coiled-coil NA 301-322
HMMPanther PTHR23244 KELCH 3e-88 1-285
HMMPanther PTHR23244:SF29 RANGAP1-INTERACTING 3e-88 1-285
Seg seg seg NA 141-147
322-331
337-348