Jatropha Genome Database

JcCA0154771.20 (JcS_101792.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154771
Scaffold:
JcS_101792 JcCA0310221(-) =JcCA0309861(+) =JcCB0372261(+) =JcCA0154771(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9REX0_RICCO 347 92.6 97.1 (tr|B9REX0) Trafficking protein particle complex subunit 6b, putative OS=Ricinus communis GN=RCOM_1429540 PE=4 SV=1
Arabidopsis_pep AT3G05000.1 305 80.6 90.9 | Symbols: | transport protein particle (TRAPP) component Bet3 family protein | chr3:1387444-1388697 REVERSE
soybean_pep Glyma19g42850.1 319 85.8 92.0  
Medicago_pep IMGA|Medtr7g140030.1 313 85.2 91.5 Transport protein particle (TRAPP) component, Bet3 chr07_pseudomolecule_IMGAG_V3 33631848-33628850 F EGN_Mt090430 20090702
grape_pep GSVIVT01021973001 326 88.0 94.3  
castor_bean_cds 30128.m008674 484 86.6 86.6 trafficking protein particle complex subunit 6b, putative
castor_bean_pep 30128.m008674 347 92.6 97.1 trafficking protein particle complex subunit 6b, putative
JAT_13201ests gi|268524892|gb|FM895590.1|FM895590 321 100.0 100.0 FM895590 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002538, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154771.20 length: 175 aa.
IPR007194 Transport protein particle (TRAPP) component
method AccNumber shortName E-value location
HMMPfam PF04051 TRAPP 2.7e-41 9-174
no_ID  
HMMPanther PTHR12817 TRAFFICKING 7.8e-70 1-175