Jatropha Genome Database

JcCA0154071.30 (JcS_200119.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154071
Scaffold:
JcS_200119 JcCD0182114(+) =JcCB0951551(+) =JcPR03DZZX0(-) =JcCB0548251(+) =JcCA0154071(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S3W0_RICCO 360 66.1 77.9 (tr|B9S3W0) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0555720 PE=4 SV=1
Arabidopsis_pep AT5G50800.1 262 55.8 74.2 | Symbols: | nodulin MtN3 family protein | chr5:20665280-20667140 REVERSE
soybean_pep Glyma04g37520.1 275 50.5 67.4  
Medicago_pep IMGA|Medtr5g076470.1 266 54.2 67.2 MtN3 and saliva related transmembrane protein chr05_pseudomolecule_IMGAG_V3 27971903-27974198 E EGN_Mt090430 20090702
grape_pep GSVIVT01010993001 321 61.2 72.4  
castor_bean_cds 29647.m002020 180 83.5 83.5 conserved hypothetical protein
castor_bean_pep 29647.m002020 360 66.1 77.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154071.30 length: 272 aa.
IPR004316 RAG1-activating protein-1-related
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR10791 STROMAL 8.7e-91 21-243
IPR018169 MtN3/saliva-related transmembrane protein, conserved region
Cellular Component GO:0016020 membrane    
HMMPfam PF03083 MtN3_slv 9.5e-29 11-96
132-216
IPR018179 RAG1-activating protein 1 homologue
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR10791:SF6 NODULIN 8.7e-91 21-243
no_ID  
Coil coil coiled-coil NA 242-263