Jatropha Genome Database

JcCA0153671.20 (JcS_100040.110)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0153671
Scaffold:
JcS_100040 JcCB0551471(-) =JcCB0362591(-) =JcCA0128181(+) =JcCB0392341(+) =JcCB0259591(-) =JcCB0283351(+) =JcCB0514151(+) =JcCA0153671(+) =JcCA0278051(+) =JcCB0432361(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q5PY87_VERFO 540 92.1 95.0 (tr|Q5PY87) NADH:cytochrome b5 reductase OS=Vernicia fordii GN=CBR1B PE=2 SV=1
Arabidopsis_pep AT5G17770.1 437 80.2 88.5 | Symbols: ATCBR, CBR1 | ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase | chr5:5864543-5866495 REVERSE
soybean_pep Glyma20g05640.1 485 81.7 90.0  
Medicago_pep IMGA|Medtr3g111130.1 484 81.7 90.0 Nitrate reductase NADH dependant chr03_pseudomolecule_IMGAG_V3 28099365-28090553 E EGN_Mt090430 20090702
grape_pep GSVIVT01037441001 512 86.7 92.5  
castor_bean_cds 29755.m000441 999 90.0 90.0 NADH-cytochrome B5 reductase, putative
castor_bean_pep 29755.m000441 538 90.3 95.3 NADH-cytochrome B5 reductase, putative
JAT_13201ests gi|268522393|gb|FM894538.1|FM894538 143 84.8 84.8 FM894538 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000323, mRNA sequence
KJC_r1 KJC_c02789 285 80.1 80.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0153671.20 length: 279 aa.
IPR001433 Oxidoreductase FAD/NAD(P)-binding
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF00175 NAD_binding_1 1.8e-29 156-262
IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00371 FPNCR 2.1e-06 155-174
193-204
249-257
IPR001834 NADH:cytochrome b5 reductase (CBR)
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00406 CYTB5RDTASE 3.5e-30 74-85
96-103
132-146
155-174
193-204
249-257
IPR008333 Oxidoreductase, FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF00970 FAD_binding_6 1.7e-28 48-146
IPR017927 Ferredoxin reductase-type FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
ProfileScan PS51384 FAD_FR 13.872 43-147
IPR017938 Riboflavin synthase-like beta-barrel
superfamily SSF63380 Riboflavin 6e-31 35-149
no_ID  
Gene3D G3DSA:3.40.50.80 no description 1.3e-46 132-279
HMMPanther PTHR19370 NADH-CYTOCHROME 8.2e-73 152-278
HMMPanther PTHR19370:SF3 NADH-CYTOCHROME 8.2e-73 152-278
superfamily SSF52343 Ferredoxin 1.6e-49 139-279