Jatropha Genome Database

JcCA0152721.10 (JcS_201909.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0152721
Scaffold:
JcS_201909 JcCB0296251(+) =JcCA0152721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SIY7_RICCO 520 84.8 92.6 (tr|B9SIY7) S-adenosylmethionine decarboxylase, putative OS=Ricinus communis GN=RCOM_0596710 PE=1 SV=1
Arabidopsis_pep AT3G02470.4 442 72.1 85.0 | Symbols: | SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase | chr3:510223-511323 FORWARD
soybean_pep Glyma18g51380.1 448 75.0 83.9  
Medicago_pep IMGA|Medtr2g026090.1 246 45.8 62.3 S-adenosylmethionine decarboxylase chr02_pseudomolecule_IMGAG_V3 7061157-7059737 E EGN_Mt090430 20090702
grape_pep GSVIVT01017856001 221 46.3 59.6  
castor_bean_cds 29673.m000902 755 86.0 86.0 s-adenosylmethionine decarboxylase, putative
castor_bean_pep 29673.m000902 520 84.8 92.6 s-adenosylmethionine decarboxylase, putative
JAT_13201ests gi|268520681|gb|FM889439.1|FM889439 965 100.0 100.0 FM889439 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003107, mRNA sequence
KJC_r1 KJC_c00127 1760 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0152721.10 length: 296 aa.
IPR001985 S-adenosylmethionine decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0004014 adenosylmethionine decarboxylase activity    
Biological Process GO:0006597 spermine biosynthetic process    
Biological Process GO:0008295 spermidine biosynthetic process    
HMMPanther PTHR11570 S-ADENOSYLMETHIONINE 3e-129 6-294
HMMPfam PF01536 SAM_decarbox 9.5e-133 6-292
IPR016067 S-adenosylmethionine decarboxylase, core
Molecular Function GO:0004014 adenosylmethionine decarboxylase activity    
Biological Process GO:0008295 spermidine biosynthetic process    
Gene3D G3DSA:3.60.90.10 no description 2.1e-112 4-294
superfamily SSF56276 S-adenosylmethionine 5e-125 13-294
IPR018166 S-adenosylmethionine decarboxylase, conserved site
PatternScan PS01336 ADOMETDC NA 65-75
IPR018167 S-adenosylmethionine decarboxylase subgroup
HMMPIR PIRSF001355 S-adenosylmethionine 1.2e-103 1-296
HMMTigr TIGR00535 SAM_DCase: 7.8e-115 10-296