Jatropha Genome Database

JcCA0152621.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0152621
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SGD1_RICCO 217 67.1 71.5 (tr|B9SGD1) Two-component response regulator ARR2, putative OS=Ricinus communis GN=RCOM_0743800 PE=4 SV=1
Arabidopsis_pep AT5G02810.1 176 57.3 65.0 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator | chr5:638283-641461 REVERSE
soybean_pep Glyma10g05520.1 184 61.8 65.6  
Medicago_pep IMGA|Medtr4g079920.1 182 59.0 64.7 Response regulator receiver; CCT chr04_pseudomolecule_IMGAG_V3 16245711-16238402 E EGN_Mt090430 20090702
grape_pep GSVIVT01025088001 195 63.7 69.4  
castor_bean_cds 29758.m000642 448 92.5 92.5 Two-component response regulator ARR2, putative
castor_bean_pep 29758.m000642 217 67.1 71.5 Two-component response regulator ARR2, putative
JAT_13201ests gi|268521515|gb|FM894267.1|FM894267 52.0 100.0 100.0 FM894267 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004575, mRNA sequence
KJC_r1 KJC_c10766 99.6 86.4 86.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0152621.10 length: 158 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 two-component response regulator activity    
Biological Process GO:0000160 two-component signal transduction system (phosphorelay)    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.8e-17 2-90
HMMSmart SM00448 no description 0.0027 1-92
ProfileScan PS50110 RESPONSE_REGULATORY 22.221 1-96
IPR011006 CheY-like
superfamily SSF52172 CheY-like 7.2e-21 3-97
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 8.3e-17 3-101
HMMPanther PTHR23283 SENSOR 2.9e-10 7-97
HMMPanther PTHR23283:SF47 SENSORY 2.9e-10 7-97
Seg seg seg NA 101-114
119-143