Jatropha Genome Database

JcCA0152411.20 (JcS_100234.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0152411
Scaffold:
JcS_100234 JcCA0296331(-) =JcCB0468081(+) =JcCA0028701(-) =JcCB0733251(-) =JcCA0152411(+) =JcCB0577931(+) =JcCA0145031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RNG4_RICCO 372 86.6 89.0 (tr|B9RNG4) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1347460 PE=4 SV=1
Arabidopsis_pep AT3G62580.1 320 73.7 82.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT1G72100.1); Has 237 Blast hits to 236 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 103; Fungi - 69; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:23146931-23147735 FORWARD
soybean_pep Glyma10g01750.1 345 80.4 86.1  
Medicago_pep IMGA|Medtr1g107090.1 323 76.1 82.3 Transmembrane protein 205, related chr01_pseudomolecule_IMGAG_V3 22512108-22516059 F EGN_Mt090430 20090702
grape_pep GSVIVT01028100001 335 77.5 83.6  
castor_bean_cds 30076.m004678 670 88.4 88.4 conserved hypothetical protein
castor_bean_pep 30076.m004678 372 86.6 89.0 conserved hypothetical protein
JAT_13201ests gi|237679841|gb|GO247146.1|GO247146 793 99.1 99.1 JcrME_RL0690 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c05430 1178 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0152411.20 length: 209 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR23241 LATE 7.7e-39 50-204
Seg seg seg NA 117-130