Jatropha Genome Database

JcCA0152151.30  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0152151
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HRB6_POPTR 491 87.1 89.0 (tr|B9HRB6) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821121 PE=4 SV=1
Arabidopsis_pep AT4G38790.1 456 82.5 86.6 | Symbols: | ER lumen protein retaining receptor family protein | chr4:18111426-18112977 FORWARD
soybean_pep Glyma12g02680.1 481 85.7 89.0  
Medicago_pep IMGA|Medtr3g156420.1 437 76.4 83.8 ER lumen protein retaining receptor; Orn/DAP/Arg decarboxylase 2 chr03_pseudomolecule_IMGAG_V3 41010513-41005039 E EGN_Mt090430 20090702
grape_pep GSVIVT01009903001 439 76.1 84.9  
castor_bean_cds 29711.m000331 878 89.1 89.1 ER lumen protein retaining receptor, putative
castor_bean_pep 29711.m000331 484 86.8 88.2 ER lumen protein retaining receptor, putative
JAT_13201ests gi|268524561|gb|FM895241.1|FM895241 868 99.8 99.8 FM895241 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002033, mRNA sequence
KJC_r1 KJC_c05470 1582 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0152151.30 length: 272 aa.
IPR000133 ER lumen protein retaining receptor
method AccNumber shortName E-value location
Biological Process GO:0006621 protein retention in ER lumen    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0046923 ER retention sequence binding    
FPrintScan PR00660 ERLUMENR 3.8e-15 48-67
75-95
166-186
188-202
202-220
HMMPanther PTHR10585 ER 2.4e-196 30-268
HMMPfam PF00810 ER_lumen_recept 1e-42 72-215
no_ID  
HMMPanther PTHR10585:SF4 ER 2.4e-196 30-268
Seg seg seg NA 26-38
104-115