Jatropha Genome Database

JcCA0151971.10 (JcS_100864.40)   /short
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0151971
Scaffold:
JcS_100864 JcCA0247261(-) =JcCA0068421(-) =JcCB0454241(+) =JcCA0151971(+) =JcCD0155669(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GKG9_POPTR 69.3 67.3 67.3 (tr|B9GKG9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_751316 PE=3 SV=1
Arabidopsis_pep AT1G63680.1 67.0 63.3 65.3 | Symbols: ATMURE, PDE316, MURE | MURE; ATP binding / acid-amino acid ligase/ ligase | chr1:23614461-23617247 FORWARD
soybean_pep Glyma05g37740.1 68.6 65.3 67.3  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01019746001 66.6 67.3 67.3  
castor_bean_cds 30190.m011226 220 94.4 94.4 UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative
castor_bean_pep 30190.m011226 68.2 65.3 67.3 UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0151971.10 length: 49 aa.
IPR004101 Mur ligase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016874 ligase activity    
Gene3D G3DSA:3.90.190.20 no description 2e-05 1-38
no_ID  
HMMPanther PTHR23135 MUR 1.2e-12 1-33
HMMPanther PTHR23135:SF4 UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE 1.2e-12 1-33
Seg seg seg NA 13-28