| JcS_100628 | JcCB0502581(+) =JcCA0139141(-) =JcCB0062331(+) =JcCB0359061(-) =JcCA0316511(+) =JcCA0151591(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B6REK6_9BRAS | 276 | 62.0 | 73.8 | (tr|B6REK6) Copia-like pol polyprotein OS=Boechera divaricarpa PE=4 SV=1 |
| Arabidopsis_pep | --No_Hits-- | ||||
| soybean_pep | Glyma02g36930.1 | 263 | 41.5 | 59.7 | |
| Medicago_pep | IMGA|Medtr8g044140.1 | 58.2 | 31.1 | 42.1 | Retrotransposon gag protein; Polynucleotidyl transferase, Ribonuclease H fold chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01014104001 | 311 | 46.2 | 64.8 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0151591.20 | length: 813 aa. | |||
| IPR001878 | Zinc finger, CCHC-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF00098 | zf-CCHC | 6.5e-05 | 97-113 |
| HMMSmart | SM00343 | no description | 0.0051 | 97-113 |
| ProfileScan | PS50158 | ZF_CCHC | 9.949 | 97-113 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 36-57 |
| HMMPanther | PTHR11439 | GAG-POL-RELATED | 1.4e-21 | 88-327 |
| Seg | seg | seg | NA | 64-79 400-411 |