Jatropha Genome Database

JcCA0151491.10 (JcS_103041.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0151491
Scaffold:
JcS_103041 JcCA0151491(-) =JcCB0037361(+) =JcCA0045261(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SZ36_RICCO 274 97.0 99.2 (tr|B9SZ36) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0212730 PE=4 SV=1
Arabidopsis_pep AT4G39870.1 219 76.7 88.7 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05590.2); Has 2018 Blast hits to 1865 proteins in 220 species: Archae - 0; Bacteria - 39; Metazoa - 1002; Fungi - 279; Plants - 129; Viruses - 34; Other Eukaryotes - 535 (source: NCBI BLink). | chr4:18502234-18504275 FORWARD
soybean_pep Glyma11g38140.1 245 82.0 94.7  
Medicago_pep IMGA|Medtr3g101690.2 233 78.2 91.7 TLDc chr03_pseudomolecule_IMGAG_V3 24659163-24662022 E EGN_Mt090430 20090702
grape_pep GSVIVT01027912001 160 64.7 79.3  
castor_bean_cds 28281.m000367 498 90.7 90.7 conserved hypothetical protein
castor_bean_pep 28281.m000367 274 97.0 99.2 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07306 111 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0151491.10 length: 133 aa.
IPR006571 TLDc
method AccNumber shortName E-value location
HMMSmart SM00584 no description 9.4e-07 1-111
no_ID  
HMMPanther PTHR23354 NUCLEOLAR 1.2e-81 1-133
HMMPanther PTHR23354:SF5 NUCLEOLAR 1.2e-81 1-133
HMMPfam PF07534 TLD 1.2e-25 2-110