Jatropha Genome Database

JcCA0150461.10 (JcS_106456.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0150461
Scaffold:
JcS_106456 JcCA0150461(-) =JcCA0290681(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9I4W8_POPTR 863 81.8 89.4 (tr|B9I4W8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569405 PE=3 SV=1
Arabidopsis_pep AT3G17760.2 804 78.1 86.7 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5); calmodulin binding | chr3:6078893-6080838 REVERSE
soybean_pep Glyma09g29900.1 804 75.6 86.6  
Medicago_pep IMGA|Medtr3g086860.1 779 72.8 83.7 Glutamate decarboxylase; chr03_pseudomolecule_IMGAG_V3 20503200-20508077 F EGN_Mt090430 20090702
grape_pep GSVIVT01000391001 796 76.2 85.8  
castor_bean_cds 29662.m000447 1263 87.0 87.0 glutamate decarboxylase, putative
castor_bean_pep 29662.m000447 843 83.7 91.4 glutamate decarboxylase, putative
JAT_13201ests gi|268523916|gb|FM890602.1|FM890602 944 99.8 99.8 FM890602 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000496, mRNA sequence
KJC_r1 KJC_c01163 311 79.6 79.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0150461.10 length: 498 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999 GROUP 5.7e-227 46-454
HMMPfam PF00282 Pyridoxal_deC 2.5e-100 38-381
IPR010107 Glutamate decarboxylase
Molecular Function GO:0004351 glutamate decarboxylase activity    
Biological Process GO:0006536 glutamate metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999:SF1 GLUTAMATE 5.7e-227 46-454
HMMTigr TIGR01788 Glu-decarb-GAD: 0 16-445
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.8e-31 64-345
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 3.3e-131 3-444
no_ID  
Seg seg seg NA 222-234