| JcS_100484 | JcPR03AVEVQ(-) =JcCB0456251(+) =JcCA0149941(+) =JcCB0490461(+) =JcCB0572431(-) =JcCA0224551(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9GTA0_POPTR | 1495 | 82.9 | 89.0 | (tr|B9GTA0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552616 PE=4 SV=1 |
| Arabidopsis_pep | AT4G01810.1 | 1363 | 75.4 | 86.1 | | Symbols: | protein transport protein-related | chr4:776734-779802 REVERSE |
| soybean_pep | Glyma19g40920.1 | 1444 | 80.4 | 87.9 | |
| Medicago_pep | IMGA|Medtr7g134070.1 | 1323 | 79.9 | 87.2 | Zinc finger, Sec23/Sec24-type; Sec23/Sec24 trunk region; Sec23/Sec24 helical region; Sec23/Sec24 beta-sandwich chr07_pseudomolecule_IMGAG_V3 31548316-31553750 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01028251001 | 1468 | 80.9 | 88.5 | |
| castor_bean_cds | 30076.m004553 | 2664 | 88.9 | 88.9 | protein transport protein sec23, putative |
| castor_bean_pep | 30076.m004553 | 1441 | 86.4 | 90.8 | protein transport protein sec23, putative |
| JAT_13201ests | gi|268526052|gb|FM891308.1|FM891308 | 204 | 99.1 | 99.1 | FM891308 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001456, mRNA sequence |
| KJC_r1 | KJC_c03696 | 1806 | 99.7 | 99.7 |
| JcCA0149941.10 | length: 875 aa. | |||
| IPR006895 | Zinc finger, Sec23/Sec24-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0006888 | ER to Golgi vesicle-mediated transport | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| Cellular Component | GO:0030127 | COPII vesicle coat | ||
| HMMPfam | PF04810 | zf-Sec23_Sec24 | 9.4e-12 | 195-234 |
| superfamily | SSF82919 | Zn-finger | 3.3e-16 | 184-260 |
| IPR006896 | Sec23/Sec24, trunk domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0006888 | ER to Golgi vesicle-mediated transport | ||
| Cellular Component | GO:0030127 | COPII vesicle coat | ||
| HMMPfam | PF04811 | Sec23_trunk | 7.2e-16 | 278-504 |
| IPR006900 | Sec23/Sec24, helical domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0006888 | ER to Golgi vesicle-mediated transport | ||
| Cellular Component | GO:0030127 | COPII vesicle coat | ||
| HMMPfam | PF04815 | Sec23_helical | 4e-15 | 627-726 |
| superfamily | SSF81811 | Helical | 2.5e-29 | 625-727 |
| IPR012990 | Sec23/Sec24 beta-sandwich | |||
| HMMPfam | PF08033 | Sec23_BS | 6.4e-13 | 521-613 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.410 | no description | 1.4e-05 | 274-503 |
| HMMPanther | PTHR11141 | PROTEIN | 4.8e-231 | 39-875 |
| Seg | seg | seg | NA | 114-125 779-796 |
| superfamily | SSF53300 | vWA-like | 1.4e-40 | 273-517 |
| superfamily | SSF81995 | beta-sandwich | 1.6e-27 | 43-624 |
| superfamily | SSF82754 | C-terminal, | 1.1e-25 | 728-873 |