Jatropha Genome Database

JcCA0149861.10 (JcS_201057.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0149861
Scaffold:
JcS_201057 JcCD0185355(-) =JcCB0568851(-) =JcCA0149861(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T1P4_RICCO 655 81.2 85.1 (tr|B9T1P4) DNA-damage-inducible protein f, putative OS=Ricinus communis GN=RCOM_0492910 PE=4 SV=1
Arabidopsis_pep AT3G08040.2 484 57.5 69.4 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter | chr3:2566593-2569397 REVERSE
soybean_pep Glyma13g41460.2 479 63.0 73.5  
Medicago_pep IMGA|Medtr3g028600.1 482 60.4 72.4 Multi antimicrobial extrusion protein MatE chr03_pseudomolecule_IMGAG_V3 7395363-7402490 E EGN_Mt090430 20090702
grape_pep GSVIVT01032092001 520 67.6 76.5  
castor_bean_cds 29606.m000098 1168 88.9 88.9 DNA-damage-inducible protein f, putative
castor_bean_pep 29606.m000098 655 81.2 85.1 DNA-damage-inducible protein f, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07774 131 93.3 93.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0149861.10 length: 484 aa.
IPR002528 Multi antimicrobial extrusion protein MatE
method AccNumber shortName E-value location
Biological Process GO:0006855 multidrug transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPanther PTHR11206 MULTIDRUG 1.1e-135 121-481
HMMPfam PF01554 MatE 8.2e-14 131-223
298-433
HMMTigr TIGR00797 matE: 9.2e-80 25-450
no_ID  
HMMPanther PTHR11206:SF3 DNA-DAMAGE-INDUCIBLE 1.1e-135 121-481
Seg seg seg NA 358-375
420-437