Jatropha Genome Database

JcCA0149621.20 (JcS_100809.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0149621
Scaffold:
JcS_100809 JcCA0149621(-) =JcCB0186461(+) =JcCB0284841(+) =JcCA0201101(+) =JcCB0368771(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SIG8_RICCO 416 76.8 83.0 (tr|B9SIG8) Ubiquitin carboxyl-terminal hydrolase OS=Ricinus communis GN=RCOM_1256040 PE=3 SV=1
Arabidopsis_pep AT3G20630.1 378 70.0 81.4 | Symbols: UBP14, TTN6, ATUBP14 | UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14); ubiquitin-specific protease | chr3:7203001-7208340 REVERSE
soybean_pep Glyma12g22240.1 387 72.5 82.8  
Medicago_pep IMGA|Medtr2g095540.1 385 64.7 73.3 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; UBA-like chr02_pseudomolecule_IMGAG_V3 21847655-21841283 E EGN_Mt090430 20090702
grape_pep GSVIVT01014465001 424 77.2 85.0  
castor_bean_cds 30027.m000845 593 84.6 84.6 Ubiquitin carboxyl-terminal hydrolase, putative
castor_bean_pep 30027.m000845 416 76.8 83.0 Ubiquitin carboxyl-terminal hydrolase, putative
JAT_13201ests gi|268523795|gb|FM890481.1|FM890481 589 100.0 100.0 FM890481 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000149, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0149621.20 length: 286 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00627 UBA 1e-08 99-135
159-194
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.6e-19 3-280
ProfileScan PS50235 UCH_2_3 13.601 1-285
IPR009060 UBA-like
superfamily SSF46934 UBA-like 1.2e-09 152-200
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
HMMSmart SM00165 no description 1.9e-11 99-137
159-196
ProfileScan PS50030 UBA 14.113 97-138
157-197
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00973 UCH_2_2 NA 229-247
no_ID  
Gene3D G3DSA:1.10.8.30 no description 7.8e-24 128-203
HMMPanther PTHR10420 UBIQUITIN 2.8e-28 26-235
HMMPanther PTHR10420:SF36 UBIQUITIN 2.8e-28 26-235
Seg seg seg NA 56-67
superfamily SSF54001 Cysteine 1.9e-34 17-285