Jatropha Genome Database

JcCA0149021.10 (JcS_100647.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0149021
Scaffold:
JcS_100647 JcCB0057761(-) =JcCB0391201(-) =JcCD0148761(+) =JcCA0018861(+) =JcCA0146401(+) =JcCA0149021(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q56E95_GOSHI 268 56.1 66.4 (tr|Q56E95) Putative ethylene responsive element binding protein 2 OS=Gossypium hirsutum PE=2 SV=1
Arabidopsis_pep AT3G16770.1 155 38.6 51.3 | Symbols: RAP2.3, ATEBP, ERF72 | ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN); DNA binding / protein binding / transcription activator/ transcription factor | chr3:5705784-5706768 FORWARD
soybean_pep Glyma09g04630.1 174 44.9 56.0  
Medicago_pep IMGA|Medtr1g107940.1 117 37.2 50.5 Pathogenesis-related transcriptional factor and ERF chr01_pseudomolecule_IMGAG_V3 22888213-22889707 E EGN_Mt090430 20090702
grape_pep GSVIVT01035098001 229 52.9 64.3  
castor_bean_cds 29726.m004094 135 84.4 84.4 conserved hypothetical protein
castor_bean_pep 29726.m004094 224 49.1 59.7 conserved hypothetical protein
JAT_13201ests gi|268522348|gb|FM894493.1|FM894493 230 97.8 97.8 FM894493 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000167, mRNA sequence
KJC_r1 KJC_c00602 1511 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0149021.10 length: 253 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.7e-11 94-105
116-132
Gene3D G3DSA:3.30.730.10 no description 4.3e-23 92-153
HMMPfam PF00847 AP2 4.3e-18 94-143
HMMSmart SM00380 no description 8.9e-37 93-156
ProfileScan PS51032 AP2_ERF 23.775 93-150
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 2.5e-24 92-153
no_ID  
Coil coil coiled-coil NA 126-147
Seg seg seg NA 126-137