Jatropha Genome Database

JcCA0145721.20 (JcS_101692.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0145721
Scaffold:
JcS_101692 JcCA0261101(-) =JcCB0897851(+) =JcCA0145721(+) =JcCA0200941(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RZY7_RICCO 252 45.8 61.4 (tr|B9RZY7) Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1003060 PE=4 SV=1
Arabidopsis_pep AT3G17380.1 226 42.7 59.6 | Symbols: | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | chr3:5950240-5952124 FORWARD
soybean_pep Glyma07g36140.1 209 41.2 57.4  
Medicago_pep IMGA|Medtr8g134250.1 162 34.8 48.2 MATH chr08_pseudomolecule_IMGAG_V3 32248235-32246420 H EGN_Mt090430 20090702
grape_pep GSVIVT01037800001 137 32.1 49.7  
castor_bean_cds --No_Hits--        
castor_bean_pep 29889.m003378 252 45.8 61.4 nucleic acid binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0145721.20 length: 304 aa.
IPR002083 MATH
method AccNumber shortName E-value location
HMMPfam PF00917 MATH 1.8e-05 23-146
178-297
HMMSmart SM00061 no description 1.7e-09 19-127
174-276
ProfileScan PS50144 MATH 23.562 14-146
169-295
IPR008974 TRAF-like
superfamily SSF49599 TRAF 1.4e-18 13-151
168-300
no_ID  
HMMPanther PTHR10420 UBIQUITIN 1e-40 34-297
HMMPanther PTHR10420:SF24 TRAF-LIKE 1e-40 34-297