Jatropha Genome Database

JcCA0144801.10 (JcS_104003.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0144801
Scaffold:
JcS_104003 JcCB0136911(+) =JcCA0144801(+) =JcCA0153071(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9N4C5_POPTR 462 92.6 97.1 (tr|B9N4C5) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_744163 PE=4 SV=1
Arabidopsis_pep AT5G61410.2 458 92.1 95.9 | Symbols: RPE | RPE; catalytic/ ribulose-phosphate 3-epimerase | chr5:24684085-24685836 REVERSE
soybean_pep Glyma05g00910.3 469 95.0 97.5  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01007976001 442 93.0 96.1  
castor_bean_cds 30138.m004049 726 91.9 91.9 ribulose-5-phosphate-3-epimerase, putative
castor_bean_pep 30138.m004049 426 89.8 90.6 ribulose-5-phosphate-3-epimerase, putative
JAT_13201ests gi|218686920|gb|GH295888.1|GH295888 787 99.8 99.8 JCL337 Jatropha curcas total leaf library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c01434 1423 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0144801.10 length: 249 aa.
IPR000056 Ribulose-phosphate 3-epimerase
method AccNumber shortName E-value location
Molecular Function GO:0004750 ribulose-phosphate 3-epimerase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPanther PTHR11749 RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1.5e-94 38-249
HMMPfam PF00834 Ribul_P_3_epim 1.4e-89 28-228
HMMTigr TIGR01163 rpe: 3.5e-130 27-239
PatternScan PS01085 RIBUL_P_3_EPIMER_1 NA 55-69
PatternScan PS01086 RIBUL_P_3_EPIMER_2 NA 159-181
IPR011060 Ribulose-phosphate binding barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF51366 Ribulose-phoshate 8.1e-78 24-244
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 2.9e-85 22-239