| JcS_100388 | JcCA0101011(+) =JcCB0371021(-) =JcCB0104191(+) =JcCA0143421(-) =JcCA0306451(+) =JcCB0424111(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RZN7_RICCO | 892 | 71.8 | 75.4 | (tr|B9RZN7) WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1000050 PE=4 SV=1 |
| Arabidopsis_pep | AT5G49430.1 | 753 | 62.2 | 71.6 | | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:20037338-20045454 REVERSE |
| soybean_pep | Glyma09g04210.1 | 809 | 66.9 | 74.0 | |
| Medicago_pep | IMGA|Medtr2g038590.1 | 434 | 61.7 | 67.5 | WD40-like chr02_pseudomolecule_IMGAG_V3 10800926-10805752 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01035014001 | 869 | 70.3 | 75.9 | |
| castor_bean_cds | 29889.m003277 | 950 | 88.0 | 88.0 | WD-repeat protein, putative |
| castor_bean_pep | 29889.m003277 | 892 | 71.8 | 75.4 | WD-repeat protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0143421.10 | length: 607 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 1.1 | 252-298 301-340 343-385 408-447 459-524 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 1.3e-45 | 224-585 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.5e-42 | 278-585 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 28.027 | 278-456 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 372-386 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 0.025 | 268-298 304-339 345-385 419-447 465-523 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 9.573 | 278-307 308-349 350-385 415-447 |
| IPR020472 | G-protein beta WD-40 repeat, region | |||
| FPrintScan | PR00320 | GPROTEINBRPT | 7.3e-06 | 285-299 372-386 434-448 |
| no_ID | ||||
| HMMPanther | PTHR16266 | WD | 3.3e-30 | 29-394 |
| Seg | seg | seg | NA | 120-129 318-332 403-419 546-562 |