Jatropha Genome Database

JcCA0141541.10 (JcS_100610.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0141541
Scaffold:
JcS_100610 JcCB0448501(-) =JcCA0081101(-) =JcCB0016381(-) =JcCA0141541(-) =JcCB0202431(+) =JcCB0451941(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RP13_RICCO 649 82.9 86.0 (tr|B9RP13) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0923270 PE=4 SV=1
Arabidopsis_pep AT4G32140.1 563 73.4 80.5 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: membrane protein (TAIR:AT3G07080.1); Has 1078 Blast hits to 1078 proteins in 273 species: Archae - 20; Bacteria - 294; Metazoa - 244; Fungi - 147; Plants - 41; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). | chr4:15523037-15525195 REVERSE
soybean_pep Glyma06g07010.1 559 72.0 79.3  
Medicago_pep IMGA|Medtr7g064590.1 82.0 25.9 42.4 Protein of unknown function DUF6, transmembrane chr07_pseudomolecule_IMGAG_V3 13051144-13045818 E EGN_Mt090430 20090702
grape_pep GSVIVT01035954001 605 76.3 81.8  
castor_bean_cds 29848.m004594 1378 89.7 89.7 conserved hypothetical protein
castor_bean_pep 29848.m004594 649 82.9 86.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0141541.10 length: 392 aa.
IPR000620 Protein of unknown function DUF6, transmembrane
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF00892 EamA 1.6e-07 135-214
no_ID  
HMMPanther PTHR23051 SOLUTE 5e-45 4-382
Seg seg seg NA 65-77
124-135
167-185
superfamily SSF103481 Multidrug 1.3e-05 272-389
135-222