Jatropha Genome Database

JcCA0141381.10 (JcS_102441.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0141381
Scaffold:
JcS_102441 JcCB0550111(-) =JcCA0308831(+) =JcCB0469081(+) =JcCA0141381(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D2D307_GOSHI 440 96.3 98.2 (tr|D2D307) Proteasome subunit alpha type OS=Gossypium hirsutum PE=2 SV=1
Arabidopsis_pep AT2G05840.1 425 91.2 97.2 | Symbols: PAA2 | PAA2 (20S PROTEASOME SUBUNIT PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase | chr2:2234226-2236053 FORWARD
soybean_pep Glyma12g22340.1 434 94.5 98.2  
Medicago_pep IMGA|Medtr2g071490.1 430 93.1 98.2 Proteasome alpha-subunit chr02_pseudomolecule_IMGAG_V3 16445494-16437330 E EGN_Mt090430 20090702
grape_pep GSVIVT01016731001 436 94.0 98.6  
castor_bean_cds 29739.m003742 654 87.7 87.7 proteasome subunit alpha type, putative
castor_bean_pep 29158.m000192 432 94.0 98.2 proteasome subunit alpha type, putative
JAT_13201ests gi|268519836|gb|FM888303.1|FM888303 934 94.9 94.9 FM888303 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001689, mRNA sequence
KJC_r1 KJC_c04784 1090 96.4 96.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0141381.10 length: 220 aa.
IPR000426 Proteasome, alpha-subunit, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0004175 endopeptidase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0019773 proteasome core complex, alpha-subunit complex    
HMMPfam PF10584 Proteasome_A_N 1.2e-15 11-33
PatternScan PS00388 PROTEASOME_A NA 11-33
IPR001353 Proteasome, subunit alpha/beta
Molecular Function GO:0004298 threonine-type endopeptidase activity    
Cellular Component GO:0005839 proteasome core complex    
Biological Process GO:0051603 proteolysis involved in cellular protein catabolic process    
HMMPfam PF00227 Proteasome 2.7e-53 39-219
no_ID  
Gene3D G3DSA:3.60.20.10 no description 4.6e-74 9-219
HMMPanther PTHR11599 PROTEASOME 2.8e-142 10-219
HMMPanther PTHR11599:SF11 PROTEASOME 2.8e-142 10-219
superfamily SSF56235 N-terminal 4.9e-73 9-219