Jatropha Genome Database

JcCA0140011.10 (JcS_100115.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0140011
Scaffold:
JcS_100115 JcCA0108651(-) =JcCA0140011(+) =JcCB0454511(+) =JcPR02GBD9G(-) =JcCB0581961(+) =JcCB0034881(-) =JcCD0187175(+) =JcCD0100800(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RCU1_RICCO 244 86.2 90.6 (tr|B9RCU1) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692280 PE=4 SV=1
Arabidopsis_pep AT4G23930.1 135 44.9 67.4 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT1G64450.1); Has 183 Blast hits to 177 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12436131-12436694 REVERSE
soybean_pep Glyma08g02720.1 203 73.2 83.3  
Medicago_pep IMGA|Medtr5g009160.1 176 61.6 71.7 Harpin-induced 1 chr05_pseudomolecule_IMGAG_V3 1939418-1940204 E EGN_Mt090430 20090702
grape_pep GSVIVT01027151001 107 75.8 95.2  
castor_bean_cds 30190.m010849 351 82.8 82.8 conserved hypothetical protein
castor_bean_pep 30190.m010849 244 86.2 90.6 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0140011.10 length: 210 aa.
IPR004864 Late embryogenesis abundant protein, type 2
method AccNumber shortName E-value location
HMMPfam PF03168 LEA_2 5.5e-10 75-191
no_ID  
Seg seg seg NA 18-52