Jatropha Genome Database

JcCA0140001.20 (JcS_101485.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0140001
Scaffold:
JcS_101485 JcCD0055831(+) =JcCA0140001(-) =JcCA0029141(+) =JcCA0275841(-) =JcCB0216691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S155_RICCO 238 100.0 100.0 (tr|B9S155) Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0633890 PE=4 SV=1
Arabidopsis_pep AT2G34430.1 215 90.6 94.9 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARD
soybean_pep Glyma16g28030.1 234 96.6 99.1  
Medicago_pep IMGA|Medtr6g041050.1 226 93.1 97.4 Chlorophyll A-B binding protein chr06_pseudomolecule_IMGAG_V3 8723376-8722408 E EGN_Mt090430 20090702
grape_pep GSVIVT01014439001 168 74.4 81.2  
castor_bean_cds 30005.m001300 412 89.9 89.9 chlorophyll A/B binding protein, putative
castor_bean_pep 29693.m002051 238 100.0 100.0 chlorophyll A/B binding protein, putative
JAT_13201ests gi|218687324|gb|GH295978.1|GH295978 694 100.0 100.0 JCL427 Jatropha curcas total leaf library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c00082 694 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0140001.20 length: 116 aa.
IPR001344 Chlorophyll A-B binding protein
method AccNumber shortName E-value location
Biological Process GO:0009765 photosynthesis, light harvesting    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR21649 CHLOROPHYLL 6.4e-90 1-116
no_ID  
HMMPfam PF00504 Chloroa_b-bind 1.6e-23 7-82
superfamily SSF103511 Chlorophyll 1.2e-39 2-115