Jatropha Genome Database

JcCA0139851.10 (JcS_100401.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0139851
Scaffold:
JcS_100401 JcCA0139851(-) =JcCB0492621(-) =JcCB0318551(-) =JcCB0550651(-) =JcCA0060621(+) =JcPR01E1J32(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SQS2_RICCO 280 71.8 81.4 (tr|B9SQS2) Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_1217180 PE=4 SV=1
Arabidopsis_pep AT4G13440.1 124 42.4 62.9 | Symbols: | calcium-binding EF hand family protein | chr4:7810215-7810679 FORWARD
soybean_pep Glyma08g02300.1 47.4 38.7 56.0  
Medicago_pep IMGA|Medtr5g009940.1 47.4 40.0 54.7 Protein kinase; Calcium-binding EF-hand chr05_pseudomolecule_IMGAG_V3 2304419-2310185 E EGN_Mt090430 20090702
grape_pep GSVIVT01027929001 139 37.9 54.2  
castor_bean_cds 30008.m000794 161 79.8 79.8 calcium ion binding protein, putative
castor_bean_pep 30008.m000794 280 71.8 81.4 calcium ion binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0139851.10 length: 188 aa.
IPR002048 Calcium-binding EF-hand
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 no description 1.2 22-50
57-85
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 8.8e-10 16-82
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 31-43
66-78
IPR018248 EF-Hand, Calmodulin
HMMPfam PF00036 efhand 1.9e-06 24-45
60-80
IPR018249 EF-HAND 2
ProfileScan PS50222 EF_HAND_2 11.222 18-53
60-88
no_ID  
HMMPanther PTHR10891 CALMODULIN 5.5e-09 16-84
superfamily SSF47473 EF-hand 3.5e-15 11-82