Jatropha Genome Database

JcCA0139601.20 (JcS_106348.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0139601
Scaffold:
JcS_106348 JcCA0139601(-) =JcCA0230201(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9AU17_SOLCI 137 32.5 49.1 (tr|Q9AU17) Polyprotein-like OS=Solanum chilense PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma15g42470.1 90.9 25.4 42.4  
Medicago_pep IMGA|Medtr5g089840.1 127 41.8 58.2 copia LTR rider, related chr05_pseudomolecule_IMGAG_V3 34952559-34951978 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0139601.20 length: 257 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 2.1e-06 230-246
HMMSmart SM00343 no description 9.3e-05 230-246
ProfileScan PS50158 ZF_CCHC 10.955 231-246
no_ID  
Coil coil coiled-coil NA 186-207
Seg seg seg NA 81-105
218-228