Jatropha Genome Database

JcCA0137431.10 (JcS_101786.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0137431
Scaffold:
JcS_101786 JcCA0308421(+) =JcCA0314481(-) =JcCA0137431(-) =JcCA0308171(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RR13_RICCO 832 94.9 95.3 (tr|B9RR13) 26S protease regulatory subunit, putative OS=Ricinus communis GN=RCOM_0708270 PE=3 SV=1
Arabidopsis_pep AT1G53750.1 809 94.7 95.5 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase | chr1:20065921-20068324 REVERSE
soybean_pep Glyma03g42370.1 820 94.1 94.6  
Medicago_pep IMGA|Medtr1g121600.1 714 91.0 93.1 AAA ATPase; 26S proteasome subunit P45 chr01_pseudomolecule_IMGAG_V3 26555002-26552697 E EGN_Mt090430 20090702
grape_pep GSVIVT01016655001 814 93.0 94.4  
castor_bean_cds 29739.m003665 1471 89.6 89.6 26S protease regulatory subunit, putative
castor_bean_pep 29739.m003665 832 94.9 95.3 26S protease regulatory subunit, putative
JAT_13201ests gi|268524166|gb|FM894845.1|FM894845 652 100.0 100.0 FM894845 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000732, mRNA sequence
KJC_r1 KJC_c00801 1009 85.2 85.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0137431.10 length: 430 aa.
IPR003593 ATPase, AAA+ type, core
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 no description 2.6e-20 205-344
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.7e-39 209-341
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 312-330
IPR005937 26S proteasome subunit P45
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0016787 hydrolase activity    
Biological Process GO:0030163 protein catabolic process    
HMMTigr TIGR01242 26Sp45: 8.7e-144 49-414
no_ID  
Coil coil coiled-coil NA 42-63
Gene3D G3DSA:1.10.8.60 no description 4.7e-19 343-411
Gene3D G3DSA:3.40.50.300 no description 1.4e-57 157-340
HMMPanther PTHR23073 26S 6.5e-256 138-429
HMMPanther PTHR23073:SF13 26S 6.5e-256 138-429
Seg seg seg NA 42-56
superfamily SSF52540 P-loop 1.2e-71 159-419